June 2026 - Mism-external - lists.renci.org

Virtual Journal Club Tomorrow
by Weyhmiller, Aubrie Anne 30 Jun '26

30 Jun '26

Hi all, Looking forward to seeing everyone at our virtual journal club tomorrow! During the CAIRNS demo two weeks ago, there was a discuss about capturing/distributing/leveraging AI sourced team knowledge. Michael Stealy from RENCI has been working on TeamBrain, a tool that essentially does what we are interested in. Michael will be joining us and giving a brief overview of TeamBrain, a demo, and then we will have an open discussion about how this could potentially fit into CAIRNS/our platform. See you tomorrow, Aubrie Aubrie Weyhmiller Research Scientist Renaissance Computing Institute (RENCI) Pronouns: she/her

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Upcoming Journal Clubs
by Weyhmiller, Aubrie Anne 22 Jun '26

22 Jun '26

Hi all, I updated the calendar invites for our journal club series. For clarity, below are our upcoming journal club dates. * Tuesday June 30 - virtual * Tuesday July 14 - hybrid * Tuesday July 28 - virtual Please let me know if you have any questions. Best, Aubrie Aubrie Weyhmiller Research Scientist Renaissance Computing Institute (RENCI) Pronouns: she/her

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Journal Club Tomorrow
by Weyhmiller, Aubrie Anne 15 Jun '26

15 Jun '26

Hi all, A reminder that our hybrid journal club is tomorrow from 11 - 12 PM. Jason and Huimin will be giving a demo of CAIRNS. You can join via zoom, or in-person at the Europa Center in the Franklin conference room. We have Chipotle build you own bowls again for lunch. I had something come up and will not be able to attend tomorrow. Sarah Tyndall will help get the Zoom and lunch set up (thank you @Tyndall, Sarah<mailto:sarahtyndall@renci.org>!!!). Please record the zoom meeting. I will schedule an automatic slack reminder to start the recording at 11:05. Best, Aubrie Aubrie Weyhmiller Research Scientist Renaissance Computing Institute (RENCI) Pronouns: she/her

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MDSC Leadership Meeting Starting 30 Minutes Late Today
by Weyhmiller, Aubrie Anne 08 Jun '26

08 Jun '26

Hi all, Due to a conflict, we will move our meeting to start at 4:30 today. I think it should only take us 15 minutes to get through the agenda items. Nrupen, I can stay until 5 if you and Ashok can so we can discuss the manuscript. If not let me know and I will find another time for us to meet. Best, Aubrie Aubrie Weyhmiller Research Scientist Renaissance Computing Institute (RENCI) Pronouns: she/her

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Tuesday 6/2 Virtual Journal Club
by Weyhmiller, Aubrie Anne 02 Jun '26

02 Jun '26

Hi all, I am looking forward to seeing you all at our next virtual journal club on Tuesday, June 2. We’ll take a few minutes at the beginning to catch up and report out on the MISM annual retreat. Then, we will discuss implementing Vivarium in the MDSC Platform. There are two relevant papers folks should review prior to our meeting: * The Viviarium paper (2022): Vivarium: an interface and engine for integrative<https://drive.google.com/file/d/1w-aiTsTr1VO7LdideV7u6CvFDgszM3qT/view?usp=…> multiscale modeling in computational biology<https://drive.google.com/file/d/1w-aiTsTr1VO7LdideV7u6CvFDgszM3qT/view?usp=…> * A multiscale model utilizing Vivarium (2020): A Multi-Scale Approach to Modeling E. coli Chemotaxis<https://drive.google.com/file/d/1Yx6AuiD3cjWvbeB9af1R14iQgC5gd3_O/view?usp=…> Best, Aubrie Aubrie Weyhmiller Research Scientist Renaissance Computing Institute (RENCI) Pronouns: she/her

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