Looking forward to seeing you for our hybrid journal club tomorrow from 11 - 12. We will discuss the Vivarium chemotaxis paper (
linked
here) we are using for our proof of concept. I'd like to discuss their Multi-Scale Design Principles and how they break multiscale processes into components.
Please note that we will not have lunch available tomorrow for in-person attendees. There is a restaurant in the downstairs lobby of the Europa Center.
From: Weyhmiller, Aubrie Anne via Mism-external <mism-external@lists.renci.org>
Date: Tuesday, July 7, 2026 at 14:40
To: Weyhmiller, Aubrie Anne via Mism-external <mism-external@lists.renci.org>
Subject: [Mism-external] MDSC July Journal Club Topics
Hi all,
I’m happy to announce the topics for our July journal clubs. This month we will focus on Vivarium.
Tuesday, July 14, 11 - 12 PM (In-person/hybrid): We will focus on the Viviarium chemotaxis paper we are using for POC-2 work (
linked
here, and attached). Please read the paper and be prepared to discuss their Multi-Scale Design Principles and how they break multiscale processes into components.
Tuesday, July 28, 11 - 12 PM (virtual): Eran Agnon will join us to talk about Viviarium 2 and to have a discussion on his vision for the October MISM Vivarium tutorial.
Best,
Aubrie
Aubrie Weyhmiller
Research Scientist
Renaissance Computing Institute (RENCI)
Pronouns: she/her